3N41

Crystal structure of the mature envelope glycoprotein complex (spontaneous cleavage) of Chikungunya virus.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.01 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.252

Literature

Macromolecules
Sequence Display for 3N41

Classification: VIRAL PROTEIN

Total Structure Weight: 99091.37

Macromolecule Entities
Molecule Chains Length Organism Details
E3 envelope glycoprotein A 65 Chikungunya virus Fragment: polyprotein fragment residues 266-320
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
E2 envelope glycoprotein B 360 Chikungunya virus Fragment: polyprotein fragment residues 330-667
Gene Name(s):
E1 envelope glycoprotein F 473 Chikungunya virus Fragment: polyprotein fragment residues 810-1190
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDG
Query on NDG

B 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

B, F N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.01 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.252
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 50.24 α = 90.00
b = 99.61 β = 102.90
c = 107.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-05-21
  • Released Date: 2010-12-01
  • Deposition author(s): Voss, J., Vaney, M.C., Duquerroy, S., Rey, F.A.

Revision History

  • 2011-07-13
    Type: Version format compliance