3M3Z

Crystal structure of HSC70/BAG1 in complex with small molecule inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 3M3Z

Classification: PROTEIN BINDING

Total Structure Weight: 55597.05

Macromolecule Entities
Molecule Chains Length Organism Details
Heat shock cognate 71 kDa protein A 381 Homo sapiens Gene Name(s): HSPA8 Gene View HSC70 HSP73 HSPA10
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
BAG family molecular chaperone regulator 1 B 114 Homo sapiens Gene Name(s): BAG1 Gene View HAP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3F5
Query on 3F5

A 5'-O-(2-amino-2-oxoethyl)-8-(methylamino)adenosine
C13 H19 N7 O5
YTEPWBADDXGTBX-JJNLEZRASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
3F5 Ki: 1850 nM (88) BindingDB

Kd: 12360 nM  BindingMOAD
Ki: 1850 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.293
  • R-Value Work: 0.198
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 40.78 α = 90.00
b = 120.97 β = 106.78
c = 53.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-03-10
  • Released Date: 2011-01-26
  • Deposition author(s): Dokurno, P., Surgenor, A.E., Shaw, T., Macias, A.T., Massey, A.J., Williamson, D.S.

Revision History

  • Version 1_0: 2011-01-26

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance