Cooperative Proton Binding in a Cluster of Carboxylic Residues
Doctrow, B.M., Schlessman, J.L., Garcia-Moreno, E.B., Castaneda, C.A., Fitch, C.A., Majumdar, A., Cieplak, M., Heroux, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Thermonuclease | 143 | Staphylococcus aureus | Mutation(s): 6  Gene Names: SFAG_02204 EC: 3.1.31.1 | ||
UniProt | |||||
Find proteins for P00644 (Staphylococcus aureus) Explore P00644  Go to UniProtKB:  P00644 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00644 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
THP Query on THP | B [auth A] | THYMIDINE-3',5'-DIPHOSPHATE C10 H16 N2 O11 P2 CSNCBOPUCJOHLS-XLPZGREQSA-N | |||
PO4 Query on PO4 | C [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
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a = 30.745 | α = 90 |
b = 60.379 | β = 97.76 |
c = 34.531 | γ = 90 |
Software Name | Purpose |
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DENZO | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
CBASS | data collection |
HKL-2000 | data reduction |