3LKF

LEUKOCIDIN F (HLGB) FROM STAPHYLOCOCCUS AUREUS WITH PHOSPHOCHOLINE BOUND


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 3LKF

Classification: TOXIN

Total Structure Weight: 34274.87

Macromolecule Entities
Molecule Chains Length Organism Details
LEUKOCIDIN F SUBUNIT A 299 Staphylococcus aureus Fragment: WATER-SOLUBLE MONOMER
Gene Name(s): hlgB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Adventitious Membrane Proteins: Beta-sheet Pore-forming Toxins/Attack Complexes

Protein Name: γ-hemolysin composed of LukF and Hlg2


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PC
Query on PC

A PHOSPHOCHOLINE
C5 H15 N O4 P
YHHSONZFOIEMCP-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.199
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 39.97 α = 90.00
b = 48.60 β = 90.00
c = 148.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-28
  • Released Date: 1999-07-28
  • Deposition author(s): Olson, R., Nariya, H., Yokota, K., Kamio, Y., Gouaux, J.E.

Revision History

  • Version 1_0: 1999-07-28

    Type: Initial release

  • Version 1_1: 2008-03-03

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance