3KFV

Crystal structure of the SH3-kinase fragment of tight junction protein 3 (TJP3) in apo-form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 3KFV

Classification: CELL ADHESION

Total Structure Weight: 35181.37

Macromolecule Entities
Molecule Chains Length Organism Details
Tight junction protein ZO-3 A 308 Homo sapiens Fragment: SH3 and Guanylate kinase-like domain residues 489-789
Gene Name(s): TJP3 Gene View ZO3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UNX
Query on UNX

A UNKNOWN ATOM OR ION
X
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.222
  • Space Group: P 4 2 2

Unit Cell:

Length (Å) Angle (°)
a = 88.65 α = 90.00
b = 88.65 β = 90.00
c = 92.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-10-28
  • Released Date: 2009-11-03
  • Deposition author(s): Tong, Y., Nedyalkova, L., Tempel, W., Zhong, N., Guan, X., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)

Revision History

  • Version 1_0: 2009-11-03

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-11-01

    Type: Advisory, Refinement description