3K5B

Crystal structure of the peripheral stalk of Thermus thermophilus H+-ATPase/synthase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.232

Literature

Macromolecules
Sequence Display for 3K5B

Classification: HYDROLASE

Total Structure Weight: 65111.04

Macromolecule Entities
Molecule Chains Length Organism Details
V-type ATP synthase, subunit (VAPC-THERM) B, G 104 Thermus thermophilus Fragment: G-17: N-terminally truncated by 17 residues
Gene Name(s): TTHA1279
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
V-type ATP synthase subunit E A, E 188 Thermus thermophilus Mutation: L134M, L171M, L178M
Gene Name(s): atpE vatE TTHA1276
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Bacterial V-type ATPase

Protein Name: V1-ATPase atomic model derived from Cryo-EM reconstructions.


Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, E, G L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.232
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 75.78 α = 90.00
b = 79.75 β = 97.64
c = 75.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-10-07
  • Released Date: 2010-02-23
  • Deposition author(s): Lee, L.K., Stewart, A.G., Donohoe, M., Bernal, R.A., Stock, D.

Revision History

  • 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance