K65R mutant HIV-1 reverse transcriptase cross-linked to DS-DNA and complexed with tenofovir-diphosphate as the incoming nucleotide substrate DOI:10.2210/pdb3jsm/pdb   NDB ID: NA0151

3JSM   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transferase/dna Complex Structure Weight: 130920.27 Molecule: DNA (5'-D(*A*TP*GP*GP*TP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3') Polymer: 1 Type: dna Length: 27 Chains: T Molecule: DNA (5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(DDG))-3') Polymer: 2 Type: dna Length: 21 Chains: P Molecule: HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT Polymer: 3 Type: protein Length: 558 Chains: A EC#: 2.7.7.49    2.7.7.7    3.1.26.13    Mutation: K65R, Q258C, C280S Organism Human immunodeficiency virus type 1 BH10 Gene Name gag-pol UniProtKB:   Protein Feature View | Search PDB | P03366     Molecule: HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT Polymer: 4 Type: protein Length: 437 Chains: B EC#: 2.7.7.49    2.7.7.7    3.1.26.13    Mutation: C280S Organism Human immunodeficiency virus type 1 BH10 Gene Name gag-pol UniProtKB:   Protein Feature View | Search PDB | P03366       Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Human immunodeficiency virus type 1   Taxonomy   Common Name: Hiv-1 Expression System: Escherichia coli   Polymer: 4 Scientific Name: Human immunodeficiency virus type 1   Taxonomy   Common Name: Hiv-1 Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1RTD    1T05    3JYT  Structural Basis for the Role of the K65R Mutation in HIV-1 Reverse Transcriptase Polymerization, Excision Antagonism, and Tenofovir Resistance      Ligand Chemical Component Hide Identifier Formula Name Interactions MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer TNV Search  Download  C9 H16 N5 O10 P3 [2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYL- TRIPHOSPHATE   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type MRG Search  C13 H20 N5 O7 P S DG dnaLinking DDG Search  C10 H14 N5 O6 P DG dnaLinking     External Domain Annotations Hide CATH Classification v3.4.0: 9 Domains - data from CATH   Pfam Classification: 7 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: NA0151     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Das, K.,  Arnold, E. Deposition:   2009-09-10 Release:   2009-09-29 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Source and taxonomy 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   3.00 R-Value: 0.252 (obs.) R-Free: 0.285 Space Group: P 31 1 2 Unit Cell:   Length [Å] Angles [°] a = 170.31 α = 90.00  b = 170.31 β = 90.00  c = 155.44 γ = 120.00      Molecule of the Month Hide Reverse Transcriptase