3J0D

Models for the T. thermophilus ribosome recycling factor bound to the E. coli post-termination complex

Structural Biology Knowledgebase: 3J0D SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 11.1 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3J0D

Classification: TRANSLATION

Total Structure Weight: 106461.38


Macromolecule Entities
Molecule Chains Length Organism Details
50S ribosomal protein L11 G 141 Escherichia coli Gene Name(s): rplK relC b3983 JW3946
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
30S ribosomal protein S12 I 123 Escherichia coli Gene Name(s): rpsL strA b3342 JW3304
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Ribosome-recycling factor J 185 Thermus thermophilus Gene Name(s): frr TTHA0858
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
ribosomal 23S RNA A 50 Escherichia coli
ribosomal 23S RNA B 22 Escherichia coli
ribosomal 23S RNA C 17 Escherichia coli
ribosomal 23S RNA D 13 Escherichia coli
ribosomal 23S RNA E 19 Escherichia coli
ribosomal 23S RNA F 19 Escherichia coli
ribosomal 16S RNA H 18 Escherichia coli
ribosomal 16S RNA h 19 Escherichia coli


Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 11.1 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-06-29
  • Released Date: 2012-04-25
  • Deposition author(s): Yokoyama, T., Shaikh, T.R., Iwakura, N., Kaji, H., Kaji, A., Agrawal, R.K.

Revision History

  • 2014-07-23
    Type: Other | Details: updated EMDB IDs of related entries
  • 2013-11-13
    Type: Sequence database correspondence | Details: Database notation updated