3IHR

Crystal Structure of Uch37


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 3IHR

Classification: HYDROLASE

Total Structure Weight: 38016.69

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin carboxyl-terminal hydrolase isozyme L5 A 328 Homo sapiens EC#: 3.4.19.12 IUBMB
Mutation: M1S
Gene Name(s): UCHL5 Gene View UCH37 AD-019 CGI-70
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMT
Query on FMT

A FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.199
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 90.09 α = 90.00
b = 98.74 β = 90.00
c = 154.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-07-30
  • Released Date: 2009-08-11
  • Deposition author(s): Burgie, E.S., Bingman, C.A., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

Revision History

  • Version 1_0: 2009-08-11

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2012-10-10

    Type: Database references

  • Version 1_3: 2013-01-09

    Type: Database references

  • Version 1_4: 2013-01-23

    Type: Database references

  • Version 1_5: 2013-06-19

    Type: Database references

  • Version 1_6: 2017-11-01

    Type: Refinement description