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Crystal structure of the NK2 fragment (28-289) of human hepatocyte growth factor/scatter factor
3HN4
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hormone
    Structure Weight: 31358.67
    Molecule: Hepatocyte growth factor
    Polymer: 1 Type: protein Length: 264
    Chains: A
    Fragment: UNP residues 28-289
    Mutation: K132E, R134E, C214A
    Organism: Homo sapiens
    Gene Names: Gene View for HGF HPTA
    UniProtKB: Protein Feature View | Search PDB | P14210  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1BHT  NK1 structure 
    1GMN  NK1-heparin complexes 
    1GMO  NK1-heparin complexes 
    1GP9  NK1 structure 
    1NK1  NK1 structure 
    2HGF  NMR N-terminal domain structure 
    2QJ2  NK1 structure 
    2QJ4  mouse NK1 structure 
    3HMR  mouse NK2 N-terminal domain structure 
    3HMS  NK2 N-terminal domain structure 
    3HMT  NK2 N-terminal domain structure 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    EPE
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    EPE C8 H18 N2 O4 S
    4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
    EPE:3HN4
    MPD
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    MPD C6 H14 O2
    (4S)-2-METHYL-2,4-PENTANEDIOL
    MPD:3HN4
    SO4
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    SO4 O4 S
    SULFATE ION
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Tolbert, W.D.

    Deposition:   2009-05-29
    Release:   2010-06-09
    Last Modified (REVDAT):   2010-09-01
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.60
    R-Value: 0.270 (obs.)
    R-Free: 0.333
    Space Group: P 65 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 48.15 α = 90.00 
    b = 48.15 β = 90.00 
    c = 461.67 γ = 120.00