3GSX

Crystal structure of the binary complex between HLA-A2 and HCMV NLV-T8V peptide variant

Structural Biology Knowledgebase: 3GSX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.190

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3GSX

Classification: IMMUNE SYSTEM

Total Structure Weight: 44574.06

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class I histocompatibility antigen, A-2 alpha chain A 274 Homo sapiens Mutation: A245V
Gene Name(s): HLA-A Gene View HLAA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Beta-2-microglobulin B 100 Homo sapiens Gene Name(s): B2M Gene View CDABP0092 HDCMA22P
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HCMV pp65 fragment 495-503, variant T8V (NLVPMVAVV) P 9 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.190
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 54.00 α = 90.00
b = 81.04 β = 114.00
c = 57.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-03-27
  • Released Date: 2009-08-04
  • Deposition author(s): Reiser, J.-B., Saulquin, X., Gras, S., Debeaupuis, E., Echasserieau, K., Kissenpfennig, A., Legoux, F., Chouquet, A., Le Gorrec, M., Machillot, P., Neveu, B., Thielens, N., Malissen, B., Bonneville, M., Housset, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4