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MDT Protein
DOI:10.2210/pdb3dnv/pdb   NDB ID: PD1154
3DNV
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 66685.21
    Molecule: Protein hipA
    Polymer: 1 Type: protein Length: 440
    Chains: A
    EC#: 2.7.11.1   
    Mutation: D309Q
    Organism Escherichia coli K-12
    Gene Names hipA b1507 JW1500
    UniProtKB:   Protein Feature View | Search PDB | P23874  
    Molecule: HTH-type transcriptional regulator hipB
    Polymer: 2 Type: protein Length: 88
    Chains: B
    Organism Escherichia coli K-12
    Gene Names hipB b1508 JW1501
    UniProtKB:   Protein Feature View | Search PDB | P23873  
    Molecule: DNA (5'-D(*DAP*DCP*DTP*DAP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DTP*DAP*DG)-3')
    Polymer: 3 Type: dna Length: 21
    Chains: T
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3DNT  atp bound hipA 
    3DNU  apo hipA 
    3DNW   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SO4
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    SO4 O4 S
    SULFATE ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD1154
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   schumacher, M.A.

    Deposition:   2008-07-02
    Release:   2009-01-27
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.68
    R-Value: 0.228 (obs.)
    R-Free: 0.285
    Space Group: P 4 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 166.34 α = 90.00 
    b = 166.34 β = 90.00 
    c = 62.09 γ = 90.00