Iodobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant (seleno version) DOI:10.2210/pdb3dna/pdb

3DNA   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 19696.19 Molecule: Lysozyme Polymer: 1 Type: protein Length: 164 Chains: A EC#: 3.2.1.17    Mutation: C54T, C97A, L99A Organism Enterobacteria phage T4 Gene Name E UniProtKB:   Protein Feature View | Search PDB | P00720         Source Hide Polymer: 1 Scientific Name: Bacteriophage t4   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 181L  T4 lysozyme L99A bound with benzene at room temperature  3DKE    3DMV    3DMX    3DMZ    3DN0    3DN1    3DN2    3DN3    3DN4    3DN6    3DN8        Ligand Chemical Component Hide Identifier Formula Name Interactions BME Search  Download  C2 H6 O S BETA-MERCAPTOETHANOL   Ligand Explorer CL Search  Download  Cl CHLORIDE ION   Ligand Explorer HED Search  Download  C4 H10 O2 S2 2-HYDROXYETHYL DISULFIDE   Ligand Explorer PIH Search  Download  C6 H5 I IODOPHENYL   Ligand Explorer PO4 Search  Download  O4 P PHOSPHATE ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) PIH Search  Download  N/A in BindingDB Ka: 40900 M-1 - data from BindingMOAD   N/A in PDBbind     Modified Residues Hide Identifier Formula Parent Type MSE Search  C5 H11 N O2 Se MET lPeptideLinking     External Domain Annotations Hide CATH Classification v3.4.0: 1 Domain - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 9 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Liu, L.,  Matthews, B.W. Deposition:   2008-07-01 Release:   2008-11-11 Last Modified (REVDAT):   2009-06-09     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.70 R-Value: 0.185 (obs.) R-Free: 0.217 Space Group: P 32 2 1 Unit Cell:   Length [Å] Angles [°] a = 60.03 α = 90.00  b = 60.03 β = 90.00  c = 95.96 γ = 120.00      Molecule of the Month Hide Lysozyme