3D89

Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 3D89

Classification: ELECTRON TRANSPORT

Total Structure Weight: 18189.11

Macromolecule Entities
Molecule Chains Length Organism Details
Rieske domain-containing protein A 157 Mus musculus Gene Name(s): Rfesd
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FES
Query on FES

A FE2/S2 (INORGANIC) CLUSTER
Fe2 S2
NIXDOXVAJZFRNF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.199
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 52.41 α = 90.00
b = 52.41 β = 90.00
c = 108.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-05-22
  • Released Date: 2008-07-15
  • Deposition author(s): Levin, E.J., McCoy, J.G., Elsen, N.L., Seder, K.D., Bingman, C.A., Wesenberg, G.E., Fox, B.G., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

Revision History

  • Version 1_0: 2008-07-15

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_2: 2017-10-25

    Type: Author supporting evidence, Refinement description