3D4S

Cholesterol bound form of human beta2 adrenergic receptor.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 3D4S

Classification: MEMBRANE PROTEIN

Total Structure Weight: 58117.27

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-2 adrenergic receptor/T4-lysozyme chimera A 490 Homo sapiens Enterobacteria phage t4 sensu lato EC#: 3.2.1.17 IUBMB
Mutation: E122W, N187E, C1054T, C1097A
Gene Name(s): E ADRB2 Gene View ADRB2R B2AR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: G Protein-Coupled Receptors (GPCRs)

Protein Name: β2 adrenergic receptor


Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CLR
Query on CLR

A CHOLESTEROL
C27 H46 O
HVYWMOMLDIMFJA-DPAQBDIFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
OLC
Query on OLC

A (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
1-Oleoyl-R-glycerol (Synonym)
C21 H40 O4
RZRNAYUHWVFMIP-GDCKJWNLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TIM
Query on TIM

A (2S)-1-(tert-butylamino)-3-[(4-morpholin- 4-yl-1,2,5-thiadiazol-3-yl)oxy]propan-2-ol
Timolol maleate (Synonym)
C13 H24 N4 O3 S
BLJRIMJGRPQVNF-JTQLQIEISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.230
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 40.00 α = 90.00
b = 75.70 β = 90.00
c = 172.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-05-14
  • Released Date: 2008-06-17
  • Deposition author(s): Hanson, M.A., Cherezov, V., Roth, C.B., Griffith, M.T., Jaakola, V-P., Chien, E.Y.T., Velasquez, J., Kuhn, P., Stevens, R.C., Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), GPCR Network (GPCR)

Revision History

  • 2011-07-13
    Type: Version format compliance
  • 2012-08-08
    Type: Other
  • 2015-06-24
    Type: Database references, Source and taxonomy
  • 2017-07-05
    Type: Database references, Source and taxonomy