POP-OUT | CLOSE
Crystal structure of Staphylococcal nuclease variant Delta+PHS V104K at cryogenic temperature
3C1F
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 16615.97
    Molecule: Thermonuclease
    Polymer: 1 Type: protein Length: 143
    Chains: A
    EC#: 3.1.31.1   
    Mutation: G50F, V51N, V104K, P117G, H124L, S128A
    Organism Staphylococcus aureus
    Gene Name nuc
    UniProtKB:   Protein Feature View | Search PDB | P00644  
     
  •   Structure Validation Hide

    Download full validation report    

     
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Staphylococcus aureus   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1STN  THE CRYSTAL STRUCTURE OF STAPHYLOCOCCAL NUCLEASE REFINED AT 1.7 ANGSTROMS RESOLUTION 
    1TQO  Cryogenic Crystal Structure of Staphylococcal Nuclease Variant truncated Delta+PHS I92E 
    2RBM  Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K at cryogenic temperature 
    2SNM  IN A STAPHYLOCOCCAL NUCLEASE MUTANT THE SIDE-CHAIN OF A LYSINE REPLACING VALINE 66 IS FULLY BURIED IN THE HYDROPHOBIC CORE 
    3BDC  Crystal structure of Staphylococcal nuclease variant Delta+PHS at cryogenic temperature 
    3C1E   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
    Search 
    Download 
    CA Ca
    CALCIUM ION
    THP
    Search 
    Download 
    THP C10 H16 N2 O11 P2
    THYMIDINE-3',5'-DIPHOSPHATE
    THP:3C1F
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Khangulov, V.S.,  Schlessman, J.L.,  Garcia-Moreno, E.B.

    Deposition:   2008-01-23
    Release:   2008-11-04
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.216 (obs.)
    R-Free: 0.261
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 31.08 α = 90.00 
    b = 60.52 β = 93.06 
    c = 38.22 γ = 90.00