3C08

Crystal structure the Fab fragment of matuzumab/EMD72000 (Fab72000)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.224

Literature

Macromolecules
Sequence Display for 3C08

Classification: IMMUNE SYSTEM

Total Structure Weight: 47515.58

Macromolecule Entities
Molecule Chains Length Organism Details
Matuzumab Fab Light chain L 212 Homo sapiens Mus musculus Details: Human/mouse chimeric derivative of mouse monoclonal antibody 425
Matuzumab Fab Heavy chain H 223 Homo sapiens Mus musculus Details: Human/mouse chimeric derivative of mouse monoclonal antibody 425

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

H, L SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.224
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.82 α = 90.00
b = 61.38 β = 90.00
c = 102.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-01-18
  • Released Date: 2008-04-15
  • Deposition author(s): Ferguson, K.M., Schmiedel, J., Knoechel, T.

Revision History

  • Version 1_0: 2008-04-15

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Derived calculations, Version format compliance