Crystal Structure of cyanobacterial Photosystem II (part 1 of 2). This file contains first monomer of PSII dimer DOI:10.2210/pdb3bz1/pdb

3BZ1   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Split Entry The asymmetric unit for this structure is composed of multiple PDB entries: 3BZ1   3BZ2     Download All Files      Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Electron Transport Structure Weight: 373727.71 Molecule: Photosystem Q(B) protein Polymer: 1 Type: protein Length: 344 Chains: A EC#: 1.10.3.9    Fragment: UNP residues 1-344 Organism Thermosynechococcus elongatus BP-1 Gene Names psbA1 psbA-1 tlr1843 UniProtKB:   Protein Feature View | Search PDB | P0A444     Molecule: Photosystem II core light harvesting protein Polymer: 2 Type: protein Length: 510 Chains: B Organism Thermosynechococcus elongatus BP-1 Gene Name psbB UniProtKB:   Protein Feature View | Search PDB | Q8DIQ1     Molecule: Photosystem II CP43 protein Polymer: 3 Type: protein Length: 473 Chains: C Organism Thermosynechococcus elongatus BP-1 Gene Name psbC UniProtKB:   Protein Feature View | Search PDB | Q8DIF8     Molecule: Photosystem II reaction center D2 protein Polymer: 4 Type: protein Length: 352 Chains: D EC#: 1.10.3.9    Organism Thermosynechococcus elongatus BP-1 Gene Names psbD1 tlr0455 psbD2 tlr1630 UniProtKB:   Protein Feature View | Search PDB | Q8CM25     Molecule: Cytochrome b559 subunit alpha Polymer: 5 Type: protein Length: 84 Chains: E Organism Thermosynechococcus elongatus BP-1 Gene Names psbE tsr1541 UniProtKB:   Protein Feature View | Search PDB | Q8DIP0     Molecule: Cytochrome b559 subunit beta Polymer: 6 Type: protein Length: 45 Chains: F Organism Thermosynechococcus elongatus BP-1 Gene Names psbF tsr1542 UniProtKB:   Protein Feature View | Search PDB | Q8DIN9     Molecule: Photosystem II reaction center protein H Polymer: 7 Type: protein Length: 66 Chains: H Organism Thermosynechococcus elongatus BP-1 Gene Names psbH tsl1386 UniProtKB:   Protein Feature View | Search PDB | Q8DJ43     Molecule: Photosystem II reaction center protein I Polymer: 8 Type: protein Length: 38 Chains: I Organism Thermosynechococcus elongatus BP-1 Gene Names psbI tsr1074 UniProtKB:   Protein Feature View | Search PDB | Q8DJZ6     Molecule: Photosystem II reaction center protein J Polymer: 9 Type: protein Length: 40 Chains: J Organism Thermosynechococcus elongatus BP-1 Gene Names psbJ tsr1544 UniProtKB:   Protein Feature View | Search PDB | P59087     Molecule: Photosystem II reaction center protein K Polymer: 10 Type: protein Length: 37 Chains: K Organism Thermosynechococcus elongatus BP-1 Gene Names psbK tsl0176 UniProtKB:   Protein Feature View | Search PDB | Q9F1K9     Molecule: Photosystem II reaction center protein L Polymer: 11 Type: protein Length: 37 Chains: L Organism Thermosynechococcus elongatus BP-1 Gene Names psbL tsr1543 UniProtKB:   Protein Feature View | Search PDB | Q8DIN8     Molecule: Photosystem II reaction center protein M Polymer: 12 Type: protein Length: 36 Chains: M Organism Thermosynechococcus elongatus BP-1 Gene Names psbM tsl2052 UniProtKB:   Protein Feature View | Search PDB | Q8DHA7     Molecule: Photosystem II manganese-stabilizing polypeptide Polymer: 13 Type: protein Length: 247 Chains: O Organism Thermosynechococcus elongatus BP-1 Gene Names psbO tll0444 UniProtKB:   Protein Feature View | Search PDB | P0A431     Molecule: Photosystem II reaction center protein T Polymer: 14 Type: protein Length: 32 Chains: T Organism Thermosynechococcus elongatus BP-1 Gene Names psbT tsr1531 UniProtKB:   Protein Feature View | Search PDB | Q8DIQ0     Molecule: Photosystem II 12 kDa extrinsic protein Polymer: 15 Type: protein Length: 104 Chains: U Fragment: UNP residues 31-134 Organism Thermosynechococcus elongatus BP-1 Gene Names psbU tll2409 UniProtKB:   Protein Feature View | Search PDB | Q9F1L5     Molecule: Cytochrome c-550 Polymer: 16 Type: protein Length: 137 Chains: V Organism Thermosynechococcus elongatus BP-1 Gene Names psbV tll1285 UniProtKB:   Protein Feature View | Search PDB | P0A386     Molecule: Protein ycf12 Polymer: 17 Type: protein Length: 46 Chains: y Organism Thermosynechococcus elongatus BP-1 Gene Names ycf12 tsr1242 UniProtKB:   Protein Feature View | Search PDB | Q8DJI1     Molecule: Photosystem II PsbX protein Polymer: 18 Type: protein Length: 50 Chains: X Organism Thermosynechococcus elongatus BP-1 Gene Names psbX tsr2013 UniProtKB:   Protein Feature View | Search PDB | Q9F1R6     Molecule: Photosystem II protein Y Polymer: 19 Type: protein Length: 28 Chains: Y Organism Thermosynechococcus elongatus BP-1 Molecule: Photosystem II reaction center protein Z Polymer: 20 Type: protein Length: 62 Chains: Z Organism Thermosynechococcus elongatus BP-1 Gene Names psbZ tsr1967 UniProtKB:   Protein Feature View | Search PDB | Q8DHJ2         Source Hide Polymer: 1 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 2 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 3 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 4 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 5 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 6 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 7 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 8 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 9 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 10 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 11 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 12 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 13 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 14 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 15 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 16 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 17 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 18 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 19 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 20 Scientific Name: Thermosynechococcus elongatus   Taxonomy         Related PDB Entries Hide Identifier Details 3BZ2  Second monomer of PSII dimer      Ligand Chemical Component Hide Identifier Formula Name Interactions BCR Search  Download  C40 H56 BETA-CAROTENE   Ligand Explorer BCT Search  Download  C H O3 BICARBONATE ION   Ligand Explorer CA Search  Download  Ca CALCIUM ION   Ligand Explorer CL Search  Download  Cl CHLORIDE ION   Ligand Explorer CLA Search  Download  C55 H72 Mg N4 O5 CHLOROPHYLL A   Ligand Explorer DGD Search  Download  C51 H96 O15 DIGALACTOSYL DIACYL GLYCEROL (DGDG)   Ligand Explorer FE2 Search  Download  Fe FE (II) ION   Ligand Explorer HEM Search  Download  C34 H32 Fe N4 O4 PROTOPORPHYRIN IX CONTAINING FE   Ligand Explorer LHG Search  Download  C38 H75 O10 P 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE   Ligand Explorer LMG Search  Download  C45 H86 O10 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE   Ligand Explorer LMT Search  Download  C24 H46 O11 DODECYL-BETA-D-MALTOSIDE   Ligand Explorer OEC Search  Download  Ca Mn4 O4 OXYGEN EVOLVING SYSTEM   Ligand Explorer PHO Search  Download  C55 H74 N4 O5 PHEOPHYTIN A   Ligand Explorer PL9 Search  Download  C53 H80 O2 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35- NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL- 2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL- 5-SOLANESYL-1,4-BENZOQUINONE   Ligand Explorer SQD Search  Download  C41 H78 O12 S 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA- D-GLUCOPYRANOSYL]-SN-GLYCEROL   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type UNK Search  C4 H9 N O2 lPeptideLinking     External Domain Annotations Hide CATH Classification v3.4.0: 8 Domains - data from CATH   Pfam Classification: 21 Domains - data from Pfam   GO Terms: 179 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange 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Biological Assembly            View in 3D More Images... PDB entry 3BZ1         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Guskov, A.,  Gabdulkhakov, A.,  Kern, J.,  Broser, M.,  Zouni, A.,  Saenger, W. Deposition:   2008-01-17 Release:   2009-01-20 Last Modified (REVDAT):   2012-06-13     Revision History    Hide Mouse over text for details 2012-06-13 Source and taxonomy 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   2.90 R-Value: 0.249 (obs.) R-Free: 0.292 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 127.69 α = 90.00  b = 225.40 β = 90.00  c = 306.11 γ = 90.00      Molecule of the Month Hide Photosystem II