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Crystal structure of domain III of the Cricket Paralysis Virus IRES RNA
 
 
DOI:10.2210/pdb3b31/pdb   NDB ID: UR0129
3B31
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: RNA
    Structure Weight: 14721.51
     
    Molecule:RNA (29-MER)
    Polymer:1Type:polyribonucleotideLength:29
    Chains:A
    Fragment:residues 6174-6202
    Mutation:U6178A, A6198U, A6199G
    Other Details:CrPV IGR IRES RNA
    Molecule:RNA (5'-R(P*UP*AP*AP*GP*AP*AP*AP*UP*UP*UP*AP*CP*CP*U)-3')
    Polymer:2Type:polyribonucleotideLength:14
    Chains:B
    Fragment:residues 6203-6216
    Other Details:CrPV IGR IRES RNA
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    IRI     IRIDIUM HEXAMMINE ION H18 Ir N6 3DLigand Explorer Link out to Ligand Expos:IRI Link out to SuperLigands:IRI Link out to SuperHapten:IRI
    PO4     PHOSPHATE ION O4 P 3DLigand Explorer Link out to Ligand Expos:PO4 Link out to SuperLigands:PO4 Link out to SuperHapten:PO4
     
     
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Biological assembly assigned by authors and generated by PISA (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Kieft, J.S.,   Costantino, D.A.,   Pfingsten, J.S.,   Rambo, R.P.

    Deposition:   2007-10-19
    Release:   2007-12-25
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 2.40
    R-Value: 0.239 (work)
    R-Free: 0.269
    Space Group: P 41 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 58.72 α = 90.00 
    b = 58.72 β = 90.00 
    c = 98.99 γ = 90.00