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Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with AlocLys-AMP and PNP
2ZIO
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ligase
    Structure Weight: 34082.88
    Molecule: Pyrrolysyl-tRNA synthetase
    Polymer: 1 Type: protein Length: 291
    Chains: A
    EC#: 6.1.1.26   
    Fragment: C-terminal fragment
    Organism Methanosarcina mazei
    Gene Names pylS MM_1445
    UniProtKB:   Protein Feature View | Search PDB | Q8PWY1  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Methanosarcina mazei   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    2E3C  ligand-free form 
    2ZCD  AMPPNP-bound form 
    2ZCE  Pyrrolysine/AMPPNP-bound form 
    2ZIN  Boc-Lys/AMPPNP-bound form 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    2PN
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    2PN H5 N O6 P2
    IMIDODIPHOSPHORIC ACID
    2PN:2ZIO
    AYB
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    AYB C20 H32 N7 O10 P
    5'-O-[(S)-({(2S)-2-amino-6-[(propoxycarbonyl)amino]hexanoyl}oxy)(hydroxy)phosphoryl]adenosine
    AYB:2ZIO
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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