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X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH 5N,6O-(N'-(N-OCTYL)IMINO)NOJIRIMYCIN IN THE ACTIVE SITE
2XWD
Primary Citation
 
 
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 116238.75
    Molecule: GLUCOSYLCERAMIDASE
    Polymer: 1 Type: protein Length: 505
    Chains: A, B
    EC#: 3.2.1.45   
    Organism Homo sapiens
    Gene Names GBA GC GLUC
    UniProtKB:   Protein Feature View | Search PDB | P04062  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Daucus carota  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 5
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1OGS  HUMAN ACID-BETA-GLUCOSIDASE 
    1Y7V  X-RAY STRUCTURE OF HUMAN ACID-BETA-GLUCOSIDASE COVALENTLYBOUND TO CONDURITOL B EPOXIDE 
    2F61  CRYSTAL STRUCTURE OF PARTIALLY DEGLYCOSYLATED ACID BETA- GLUCOSIDASE 
    2J25  PARTIALLY DEGLYCOSYLATED GLUCOCERAMIDASE 
    2V3D  ACID-BETA-GLUCOSIDASE WITH N-BUTYL-DEOXYNOJIRIMYCIN 
    2V3E  ACID-BETA-GLUCOSIDASE WITH N-NONYL-DEOXYNOJIRIMYCIN 
    2V3F  ACID-BETA-GLUCOSIDASE PRODUCED IN CARROT 
    2WCG  X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH N- OCTYL(CYCLIC GUANIDINE)-NOJIRIMYCIN IN THE ACTIVE SITE 
    2WKL  VELAGLUCERASE ALFA 
    2XWE  X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH 5N,6S -(N'-(N-OCTYL)IMINO)-6-THIONOJIRIMYCIN IN THE ACTIVE SITE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    BMA
    Search 
    Download      		BMA C6 H12 O6
    BETA-D-MANNOSE
    FUC
    Search 
    Download      		FUC C6 H12 O5
    ALPHA-L-FUCOSE
    LGS
    Search 
    Download      		LGS C15 H28 N2 O5
    (3Z,5S,6R,7S,8R,8aR)-3-(octylimino)hexahydro[1,3]oxazolo[3,4- a]pyridine-5,6,7,8-tetrol
    		LGS:2XWD
    MAN
    Search 
    Download      		MAN C6 H12 O6
    ALPHA-D-MANNOSE
    NAG
    Search 
    Download      		NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    SO4
    Search 
    Download      		SO4 O4 S
    SULFATE ION
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    LGS
    Search 
    Download      		LGS
    N/Ain BindingDB
    N/Ain BindingMoad
    Ki: 110 nM - data from PDBbind  
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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