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COMPLEX OF RABBIT ENDOGENOUS LENTIVIRUS (RELIK)CAPSID WITH CYCLOPHILIN A
2XGY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Viral Protein/isomerase
    Structure Weight: 35517.69
    Molecule: RELIK CAPSID N-TERMINAL DOMAIN
    Polymer: 1 Type: protein Length: 149
    Chains: A
    Organism: Oryctolagus cuniculus
    Molecule: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A
    Polymer: 2 Type: protein Length: 173
    Chains: B
    EC#: 5.2.1.8   
    Organism: Homo sapiens
    Gene Names: Gene View for PPIA CYPA
    UniProtKB: Protein Feature View | Search PDB | P62937  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Oryctolagus cuniculus   Taxonomy   Common Name: Rabbit Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1AK4  HUMAN CYCLOPHILIN A BOUND TO THE AMINO- TERMINAL DOMAIN OF HIV-1 CAPSID 
    1AWQ  CYPA COMPLEXED WITH HAGPIA (PSEUDO-SYMMETRIC MONOMER) 
    1AWR  CYPA COMPLEXED WITH HAGPIA 
    1AWS  SECYPA COMPLEXED WITH HAGPIA (PSEUDO-SYMMETRIC MONOMER) 
    1AWT  SECYPA COMPLEXED WITH HAGPIA 
    1AWU  CYPA COMPLEXED WITH HVGPIA (PSEUDO-SYMMETRIC MONOMER) 
    1AWV  CYPA COMPLEXED WITH HVGPIA 
    1BCK  HUMAN CYCLOPHILIN A COMPLEXED WITH 2-THR CYCLOSPORIN 
    1CWA  MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: CYCLOSPORIN A; CHAIN: C; ENGINEERED: YES 
    1CWB  MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: [4 -[(E)-2-BUTENYL]-4,4,N-TRIMETHYL-L- THREONINE]1- CYCLOSPORIN; CHAIN: C; ENGINEERED : YES 
    1CWC  MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: [4, N-DIMETHYLNORLEUCINE]4-CYCLOSPORIN; CHAIN: C ; ENGINEERED: YES 
    1CWF  HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL CYCLOSPORIN 
    1CWH  HUMAN CYCLOPHILIN A COMPLEXED WITH 3-D-SER CYCLOSPORIN 
    1CWI  HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL 3 -(N-METHYL)-D-ALANINE CYCLOSPORIN 
    1CWJ  HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL 3 -S-METHYL-SARCOSINE CYCLOSPORIN 
    1CWK  HUMAN CYCLOPHILIN A COMPLEXED WITH 1-(6,7 -DIHYDRO)MEBMT 2-VAL 3-D-(2-S-METHYL) SARCOSINE CYCLOSPORIN 
    1CWL  HUMAN CYCLOPHILIN A COMPLEXED WITH 4 4- HYDROXY-MELEU CYCLOSPORIN 
    1CWM  HUMAN CYCLOPHILIN A COMPLEXED WITH 4 MEILE CYCLOSPORIN 
    1CWO  HUMAN CYCLOPHILIN A COMPLEXED WITH THR2, LEU5, D-HIV8, LEU10 CYCLOSPORIN 
    1FGL  CYCLOPHILIN A COMPLEXED WITH A FRAGMENT OF HIV-1 GAGPROTEIN 
    1M63  CRYSTAL STRUCTURE OF CALCINEURIN-CYCLOPHILIN- CYCLOSPORINSHOWS COMMON BUT DISTINCT RECOGNITION OF IMMUNOPHILIN-DRUGCOMPLEXES 
    1M9C  X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ HIV-1 CA N-TERMINAL DOMAIN (1-146) M- TYPE COMPLEX. 
    1M9D  X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ HIV-1 CA N-TERMINAL DOMAIN (1-146) O- TYPE CHIMERA COMPLEX. 
    1M9E  X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ HIV-1 CA N-TERMINAL DOMAIN (1-146) M- TYPE H87A COMPLEX. 
    1M9F  X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ HIV-1 CA N-TERMINAL DOMAIN (1-146) M- TYPE H87A,A88M COMPLEX. 
    1M9X  X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ HIV-1 CA N-TERMINAL DOMAIN (1-146) M- TYPE H87A,A88M,G89A COMPLEX. 
    1M9Y  X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ HIV-1 CA N-TERMINAL DOMAIN (1-146) M- TYPE H87A,G89A COMPLEX. 
    1MF8  CRYSTAL STRUCTURE OF HUMAN CALCINEURIN COMPLEXED WITHCYCLOSPORIN A AND HUMAN CYCLOPHILIN 
    1MIK  MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: [(5- HYDROXY)NORVALINE2]-CYCLOSPORIN; CHAIN: B; ENGINEERED: YES 
    1NMK  THE SANGLIFEHRIN-CYCLOPHILIN INTERACTION: DEGRADATION WORK,SYNTHETIC MACROCYCLIC ANALOGUES , X-RAY CRYSTAL STRUCTUREAND BINDING DATA 
    1OCA  HUMAN CYCLOPHILIN A, UNLIGATED, NMR, 20 STRUCTURES 
    1RMH  RECOMBINANT CYCLOPHILIN A FROM HUMAN T CELL 
    1VBS  STRUCTURE OF CYCLOPHILIN COMPLEXED WITH (D) ALA CONTAINING TETRAPEPTIDE 
    1VBT  STRUCTURE OF CYCLOPHILIN COMPLEXED WITH SULFUR -SUBSTITUTED TETRAPEPTIDE AAPF 
    1W8L  ENZYMATIC AND STRUCTURAL CHARACTERIZATION OF NON PEPTIDE LIGAND CYCLOPHILIN COMPLEXES 
    1W8M  ENZYMATIC AND STRUCTURAL CHARACTERISATION OF NON PEPTIDE LIGAND CYCLOPHILIN COMPLEXES 
    1W8V  ENZYMATIC AND STRUCTURAL CHARACTERIZATION OF NON PEPTIDE LIGAND CYCLOPHILIN COMPLEXES 
    2ALF  CRYSTAL STRUCTURE OF HUMAN CYPA MUTANT K131A 
    2CPL  CYCLOPHILIN A 
    2CYH  CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE ALA- PRO 
    2RMA  CYCLOPHILIN A COMPLEXED WITH CYCLOSPORIN A 
    2RMB  CYCLOPHILIN A COMPLEXED WITH DIMETHYL- CYCLOSPORIN A 
    2X25  FREE ACETYL-CYPA ORTHORHOMBIC FORM 
    2X2A  FREE ACETYL-CYPA TRIGONAL FORM 
    2X2C  ACETYL-CYPA:CYCLOSPORINE COMPLEX 
    2X2D  ACETYL-CYPA:HIV-1 N-TERM CAPSID DOMAIN COMPLEX 
    2XGU  STRUCTURE OF THE N-TERMINAL DOMAIN OF CAPSID PROTEIN FROM RABBIT ENDOGENOUS LENTIVIRUS (RELIK) 
    3CYH  CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE SER- PRO 
    3CYS  CYCLOPHILIN A COMPLEXED WITH CYCLOSPORIN A ( NMR, 22 STRUCTURES) 
    4CYH  CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE HIS- PRO 
    5CYH  CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE GLY- PRO 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GOL
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    GOL C3 H8 O3
    GLYCEROL
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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