2X95

Crystal structure of AnCE-lisinopril-tryptophan analogue, lisW-S complex

Structural Biology Knowledgebase: 2X95 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.194

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2X95

Classification: HYDROLASE

Total Structure Weight: 72030.68

Macromolecule Entities
Molecule Chains Length Organism Details
ANGIOTENSIN CONVERTING ENZYME A 599 Drosophila melanogaster EC#: 3.4.15.1 IUBMB
Fragment: RESIDUES 17-615
Gene Name(s): Ance Race CG8827
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 6 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
X95
Query on X95

A (S)-1-N2-(1-CARBOXY-3-PHENYLPROPYL)-L-LYSYL- L-TRYPTOPHAN
C27 H34 N4 O5
JXNGDSIPMBNTNL-KMDXXIMOSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EPE
Query on EPE

A 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES (Synonym)
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BMA
Query on BMA

A BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MAN
Query on MAN

A ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
X95 N/A in BindingDB
N/A in BindingMoad
Ki: 11300 nM  PDBbind
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_002050 (CLT,LYS,TRP) A N~2~-[(1S)-1-carboxy-3-phenylpropyl]-L-lysyl-D-tryptophan Peptide-like /
Enzyme inhibitor
Ligand Explorer Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.194
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 172.64 α = 90.00
b = 172.64 β = 90.00
c = 102.41 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-03-14
  • Released Date: 2010-06-02
  • Deposition author(s): Akif, M., Georgiadis, D., Mahajan, A., Dive, V., Sturrock, E.D., Isaac, R.E., Acharya, K.R.

Revision History

  • 2013-05-29
    Type: Other | Details: Add PRD info