RCSB Protein Data Bank - RCSB PDB - 2WCG Structure Summary

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X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH N-OCTYL(CYCLIC GUANIDINE)-NOJIRIMYCIN IN THE ACTIVE SITE

DOI:10.2210/pdb2wcg/pdb

2WCG

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Primary Citation

Related Citations in PDB Entry (REMARK 1) Hide

Molecular Description

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Source

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Polymer: 1

Scientific Name:

Homo sapiens

Taxonomy

Common Name:

Human

Expression System:

Daucus carota

Polymer: 2

Scientific Name:

Synthetic construct

Taxonomy

Ligand Chemical Component

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Identifier	Formula	Name	Interactions
CL Search Download	Cl	CHLORIDE ION		Ligand Explorer
FU4 Search Download	C₆ H₁₂ O₄	2,6-ANHYDRO-1-DEOXY-D-GALACTITOL		Ligand Explorer
MAN Search Download	C₆ H₁₂ O₆	ALPHA-D-MANNOSE		Ligand Explorer
MT5 Search Download	C₁₅ H₃₀ N₃ O₄	N-[(3E,5R,6R,7S,8R,8AR)-5,6,7,8-TETRAHYDROXYHEXAHYDROIMIDAZO[1,5- A]PYRIDIN-3(2H)-YLIDENE]OCTAN-1-AMINIUM		Ligand Explorer
NAG Search Download	C₈ H₁₅ N O₆	N-ACETYL-D-GLUCOSAMINE		Ligand Explorer
SO4 Search Download	O₄ S	SULFATE ION		Ligand Explorer

External Ligand Annotations

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Identifier

Binding Affinity (Sequence Identity %)

N/A	in BindingDB
IC50:	4000 nM	- data from BindingMOAD
Ki:	420 nM	- data from PDBbind

External Domain Annotations Hide
CATH Classification v3.4.0: 4 Domains - data from CATH

Pfam Classification: 1 Domain - data from Pfam

GO Terms: 24 Terms - data from GO
Structural Biology Knowledgebase Data Hide

Data in orange boxes are gathered from external resources (when available).

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Biological Assembly 1

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Biological assembly 1 generated by PQS (software)

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Deposition Summary

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Authors: Brumshtein, B., Aguilar, M., Garcia-Moreno, M.I., Mellet, C.O., Garcia-Fernandez, J.M., Silman, I., Shaaltiel, Y., Aviezer, D., Sussman, J.L., Futerman, A.H.

Deposition:	2009-03-12
Release:	2009-11-24

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2011-07-13
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Experimental Details

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Method: X-RAY DIFFRACTION
Exp. Data:
Structure Factors
EDS

Unit Cell:
	Length [Å]	Angles [°]
	a = 68.31	α = 90.00
	b = 96.83	β = 104.34
	c = 83.23	γ = 90.00