2VRH

Structure of the E. coli trigger factor bound to a translating ribosome

Structural Biology Knowledgebase: 2VRH SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 19.0 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2VRH

Classification: RIBOSOME

Total Structure Weight: 78488.88

Macromolecule Entities
Molecule Chains Length Organism Details
TRIGGER FACTOR A 432 Escherichia coli EC#: 5.2.1.8 IUBMB
Details: BASED ON PDB 1W26_A. RESIDUES 22-62 WERE REPLACED WITH THE CORRESPONDING RESIDUES OF PDB 1OMS_B
Gene Name(s): tig b0436 JW0426
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S RIBOSOMAL PROTEIN L23 B 100 Escherichia coli Details: BASED ON PDB 2AW4_T
Gene Name(s): rplW b3318 JW3280
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S RIBOSOMAL PROTEIN L24 C 103 Escherichia coli Fragment: RESIDUES 2-104
Details: BASED ON PDB 2AW4_U
Gene Name(s): rplX b3309 JW3271
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
50S RIBOSOMAL PROTEIN L29 D 63 Escherichia coli Details: BASED ON PDB 2AW4_X
Gene Name(s): rpmC b3312 JW3274
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 19.0 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2008-04-07
  • Released Date: 2008-06-17
  • Deposition author(s): Merz, F., Boehringer, D., Schaffitzel, C., Preissler, S., Hoffmann, A., Maier, T., Rutkowska, A., Lozza, J., Ban, N., Bukau, B., Deuerling, E.

Revision History

  • 2013-08-07
    Type: Refinement description | Details: REMARK 3
  • 2013-08-07
    Type: Other | Details: SCALE3, SCALE2, CRYST1, SCALE1
  • 2011-12-14
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-12-14
    Type: Version format compliance | Details: REMARK 4
  • 2011-12-14
    Type: Other | Details: REMARK 247,REMARK 900