2RAH

Human FDPS synthase in complex with novel inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 2RAH

Classification: TRANSFERASE

Total Structure Weight: 43900.89

Macromolecule Entities
Molecule Chains Length Organism Details
Farnesyl pyrophosphate synthetase A 378 Homo sapiens EC#: 2.5.1.10 IUBMB
Gene Name(s): FDPS Gene View FPS KIAA1293
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
11P
Query on 11P

A [(7R)-6,7-dihydro-5H-cyclopenta[c]pyridin- 7-yl(hydroxy)methylene]bis(phosphonic acid)
C9 H13 N O7 P2
WBALRBOBYFLYPZ-MRVPVSSYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.217
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 111.17 α = 90.00
b = 111.17 β = 90.00
c = 70.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-09-15
  • Released Date: 2007-09-25
  • Deposition author(s): Evdokimov, A.G., Barnett, B.L., Ebetino, F.H., Pokross, M.

Revision History

  • Version 1_0: 2007-09-25

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance