2PJ6

CRYSTAL STRUCTURE OF ACTIVATED PORCINE PANCREATIC CARBOXYPEPTIDASE B 2-(3-Aminomethyl-phenyl)-3-{hydroxy-[(R)-2-methyl-1-(2-phenyl-ethanesulfonylamino)-propyl]-phosphinoyl}-propionic acid COMPLEX


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 2PJ6

Classification: HYDROLASE

Total Structure Weight: 35287.80

Macromolecule Entities
Molecule Chains Length Organism Details
Carboxypeptidase B A 306 Sus scrofa EC#: 3.4.17.2 IUBMB
Fragment: CATALYTIC DOMAIN
Gene Name(s): CPB1 Gene View CPB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
059
Query on 059

A (2S)-2-[3-(AMINOMETHYL)PHENYL]-3-{(S)-HYDROXY[(1R)- 2-METHYL-1-{[(2-PHENYLETHYL)SULFONYL]AMINO}PROPYL]PHOSPHORYL}PROPANOIC ACID
C22 H31 N2 O6 P S
CTQDLSDUHUFBQW-LEWJYISDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
059 N/A in BindingDB
IC50: 49 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.229
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 77.68 α = 90.00
b = 78.43 β = 90.00
c = 49.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-04-15
  • Released Date: 2008-01-22
  • Deposition author(s): Adler, M., Whitlow, M.

Revision History

  • Version 1_0: 2008-01-22

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance