Download MendeleyCrystal structure of the C-terminal domain of protein MJ0236 (Y236_METJA)
Eswaramoorthy, S., Burley, S.K., Swaminathan, S.To be published.
2PHP
Crystal structure of the C-terminal domain of protein MJ0236 (Y236_METJA)
- PDB DOI: https://doi.org/10.2210/pdb2PHP/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Methanocaldococcus jannaschii DSM 2661
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2007-04-11 Released: 2007-04-24
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.03 Å
- R-Value Free: 0.238
- R-Value Work: 0.216
- R-Value Observed: 0.216
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized protein MJ0236 | A, B, C [auth D], D [auth E] | 192 | Methanocaldococcus jannaschii DSM 2661 | Mutation(s): 4 Gene Names: MJ0236 |  |
UniProt | |||||
Find proteins for Q57688 (Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)) Explore Q57688 Go to UniProtKB: Q57688 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q57688 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CL Query on CL | E [auth A] F [auth A] G [auth A] H [auth B] I [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C [auth D], D [auth E] | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.03 Å
- R-Value Free: 0.238
- R-Value Work: 0.216
- R-Value Observed: 0.216
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 147.077 | α = 90 |
| b = 112.141 | β = 109.28 |
| c = 67.253 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SOLVE | phasing |
| SHARP | phasing |
| CNS | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2007-04-24 Deposition Author(s): Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2007-04-24
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2021-02-03
Changes: Database references, Derived calculations, Structure summary
