2OOM

NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA/RNA aptamer


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 12
  • Selection Criteria: The Submitted Structures Are the 12 Structures with Zero Violation On Noe Distance Dihedral and with the Lowest Energy.

Literature

Macromolecules
Sequence Display for 2OOM

Classification: RNA

Total Structure Weight: 10304.27

Macromolecule Entities
Molecule Chains Length Organism Details
RNA 16-mer A 16 synthetic
TAR RNA element of HIV-1 B 16 synthetic

Small Molecules
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
10C
Query on 10C
B RNA LINKING C10 H14 N3 O8 P C
LCA
Query on LCA
B RNA LINKING C11 H14 N5 O7 P A

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 12
  • Selection Criteria: The submitted structures are the 12 structures with zero violation on NOE distance, dihedral and with the lowest energy.

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-01-26
  • Released Date: 2008-01-29
  • Deposition author(s): Lebars, I., Richard, T., Di Primo, C., Toulme, J.J.

Revision History

  • Version 1_0: 2008-01-29

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance