2OKK

The X-ray crystal structure of the 65kDa isoform of Glutamic Acid Decarboxylase (GAD65)

Structural Biology Knowledgebase: 2OKK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2OKK

Classification: LYASE

Total Structure Weight: 57083.23

Macromolecule Entities
Molecule Chains Length Organism Details
Glutamate decarboxylase 2 A 497 Homo sapiens EC#: 4.1.1.15 IUBMB
Fragment: residues 88-584
Gene Name(s): GAD2 Gene View GAD65

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ABU
Query on ABU

A GAMMA-AMINO-BUTANOIC ACID
GAMMA(AMINO)-BUTYRIC ACID (Synonym)
C4 H9 N O2
BTCSSZJGUNDROE-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
GOL
Query on GOL

A GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
LLP
Query on LLP
A L-PEPTIDE LINKING C14 H22 N3 O7 P LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.196
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 78.25 α = 90.00
b = 99.06 β = 90.00
c = 120.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-01-17
  • Released Date: 2007-03-27
  • Deposition author(s): Buckle, A.M., Fenalti, G., Law, R.H.P., Whisstock, J.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values