2OJG

Crystal structure of ERK2 in complex with N,N-dimethyl-4-(4-phenyl-1H-pyrazol-3-yl)-1H-pyrrole-2-carboxamide

Structural Biology Knowledgebase: 2OJG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.216

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2OJG

Classification: TRANSFERASE

Total Structure Weight: 43992.82

Macromolecule Entities
Molecule Chains Length Organism Details
Mitogen-activated protein kinase 1 A 380 Homo sapiens EC#: 2.7.11.24 IUBMB
Gene Name(s): MAPK1 Gene View ERK2 PRKM1 PRKM2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
19A
Query on 19A

A N,N-DIMETHYL-4-(4-PHENYL-1H-PYRAZOL-3-YL)- 1H-PYRROLE-2-CARBOXAMIDE
C16 H16 N4 O
OPBUUQBZKJSWTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
19A Ki: 2300 nM (100) BindingDB

Ki: 2300 nM  BindingMOAD
Ki: 2300 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.216
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.67 α = 90.00
b = 70.78 β = 109.03
c = 60.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-01-12
  • Released Date: 2007-02-06
  • Deposition author(s): Xie, X., Jacobs, M.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4