X-ray crystal structure of beta secretase complexed with 2-aminoquinoline DOI:10.2210/pdb2ohl/pdb

2OHL   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 45444.92 Molecule: Beta-secretase 1 Polymer: 1 Type: protein Length: 402 Chains: A EC#: 3.4.23.46    Fragment: protease domain Mutation: R56K, R57K Organism Homo sapiens Gene Names BACE1 BACE KIAA1149 UniProtKB:   Protein Feature View | Search PDB | P56817         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)       Related PDB Entries Hide Identifier Details 2OF0  Crystal structure of beta secretase complexed with compound 5  2OHK  Crystal structure of beta secretase complexed with 1-amino-isoquinoline  2OHM  Crystal structure of beta secretase complexed with 2,3-diaminopyridine  2OHN  Crystal structure of beta secretase complexed with compound 4  2OHP  Crystal structure of beta secretase complexed with compound 3  2OHQ  Crystal structure of beta secretase complexed with compound 4  2OHR  Crystal structure of beta secretase complexed with compound 6a  2OHS  Crystal structure of beta secretase complexed with compound 6b  2OHT  Crystal structure of beta secretase complexed with compound 7  2OHU  Crystal structure of beta secretase complexed with compound 8b      Ligand Chemical Component Hide Identifier Formula Name Interactions 2AQ Search  Download  C9 H8 N2 QUINOLIN-2-AMINE   Ligand Explorer DMS Search  Download  C2 H6 O S DIMETHYL SULFOXIDE   Ligand Explorer IOD Search  Download  I IODIDE ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) 2AQ Search  Download  IC50: 800000 - 2000000 nM (99 - 100) - data from BindingDB   Kd: 900000 nM (99) - data from BindingDB   N/A in BindingMoad N/A in PDBbind     External Domain Annotations Hide SCOP Classification v1.75: 1 Domain - data from SCOP   CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Patel, S. Deposition:   2007-01-10 Release:   2007-03-13 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.65 R-Value: 0.206 (obs.) R-Free: 0.282 Space Group: P 61 2 2 Unit Cell:   Length [Å] Angles [°] a = 102.83 α = 90.00  b = 102.83 β = 90.00  c = 168.85 γ = 120.00      Molecule of the Month Hide beta-Secretase Amyloid-beta Precursor Protein