2OD8

Structure of a peptide derived from Cdc9 bound to PCNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.247

Literature

Macromolecules
Sequence Display for 2OD8

Classification: PROTEIN BINDING

Total Structure Weight: 31401.00

Macromolecule Entities
Molecule Chains Length Organism Details
Proliferating cell nuclear antigen A 258 Saccharomyces cerevisiae Gene Name(s): POL30 YBR088C YBR0811
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
DNA ligase I, mitochondrial precursor B 22 Saccharomyces cerevisiae EC#: 6.5.1.1 IUBMB
Fragment: Residues 32-53
Gene Name(s): CDC9 YDL164C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.247
  • Space Group: I 2 3

Unit Cell:

Length (Å) Angle (°)
a = 139.28 α = 90.00
b = 139.28 β = 90.00
c = 139.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-12-21
  • Released Date: 2007-05-01
  • Deposition author(s): Chapados, B.R., Tainer, J.A.

Revision History

  • Version 1_0: 2007-05-01

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_3: 2017-10-18

    Type: Refinement description