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Structure of a peptide derived from Cdc9 bound to PCNA
2OD8
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Protein Binding
    Structure Weight: 31401.17
    Molecule: Proliferating cell nuclear antigen
    Polymer: 1 Type: protein Length: 258
    Chains: A
    Organism Saccharomyces cerevisiae
    Gene Names POL30 YBR088C YBR0811
    UniProtKB:   Protein Feature View | Search PDB | P15873  
    Molecule: DNA ligase I, mitochondrial precursor
    Polymer: 2 Type: protein Length: 22
    Chains: B
    EC#: 6.5.1.1   
    Fragment: Residues 32-53
    Organism Saccharomyces cerevisiae S288c
    Gene Names CDC9 YDL164C
    UniProtKB:   Protein Feature View | Search PDB | P04819  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast Expression System: Escherichia coli bl21(de3)  
    Polymer: 2
    Scientific Name: Synthetic construct (Saccharomyces cerevisiae S288c)   Taxonomy    
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Chapados, B.R.,  Tainer, J.A.

    Deposition:   2006-12-21
    Release:   2007-05-01
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
    2011-07-13
    Flag residual B-value
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.80
    R-Value: 0.249 (obs.)
    R-Free: 0.285
    Space Group: I 2 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 139.28 α = 90.00 
    b = 139.28 β = 90.00 
    c = 139.28 γ = 90.00