2MQV

Solution NMR structure of the U5-primer binding site (U5-PBS) domain of murine leukemia virus RNA genome bound to the retroviral nucleocapsid protein


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 1000
  • Conformers Submitted: 10
  • Selection Criteria: Structures with Acceptable Covalent Geometry

Literature

Macromolecules
Sequence Display for 2MQV

Classification: VIRAL PROTEIN / RNA

Total Structure Weight: 28336.54


Macromolecule Entities
Molecule Chains Length Organism Details
Nucleocapsid protein p10 A 56 Murine leukemia virus Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (68-MER) B 68 Murine leukemia virus

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 1000
  • Conformers Submitted: 10
  • Selection Criteria: structures with acceptable covalent geometry

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-06-27
  • Released Date: 2014-09-17
  • Deposition author(s): D'Souza, V.M., Yildiz, Z.

Revision History

  • Version 1_0: 2014-09-17

    Type: Initial release

  • Version 1_1: 2014-10-08

    Type: Database references

  • Version 1_2: 2014-12-24

    Type: Database references