2MHZ

Structure of Exocyclic S,S N6,N6-(2,3-Dihydroxy-1,4-butadiyl)-2'-Deoxyadenosine Adduct Induced by 1,2,3,4-Diepoxybutane in DNA


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 8
  • Conformers Submitted: 8
  • Selection Criteria: Back Calculated Data Agree with Experimental Noesy Spectrum

Literature

Macromolecules
Sequence Display for 2MHZ

Classification: DNA

Total Structure Weight: 6795.51

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*GP*GP*AP*CP*(SDE)P*AP*GP*AP*AP*G)-3' A 11 synthetic
5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3' B 11 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SDE
Query on SDE
A DNA LINKING C14 H22 N5 O8 P DA

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 8
  • Conformers Submitted: 8
  • Selection Criteria: back calculated data agree with experimental NOESY spectrum

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-12-05
  • Released Date: 2014-05-28
  • Deposition author(s): Kowal, E.A., Seneviratne, U., Wickramaratne, S., Doherty, K.E., Cao, X., Tretyakova, N., Stone, M.P.

Revision History

  • Version 1_0: 2014-05-28

    Type: Initial release

  • Version 1_1: 2014-06-04

    Type: Database references