2MD8

NMR structure of Sp140 PHD finger cis conformer

Structural Biology Knowledgebase: 2MD8 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2MD8

Classification: TRANSCRIPTION

Total Structure Weight: 6567.13

Macromolecule Entities
Molecule Chains Length Organism Details
Nuclear body protein SP140 C 56 Homo sapiens Fragment: UNP residues 687-738
Gene Name(s): SP140 Gene View LYSP100
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

C ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-09-02
  • Released Date: 2013-11-13
  • Deposition author(s): Zucchelli, C., Quilici, G., Musco, G.

Revision History

  • 2014-01-22
    Type: Citation | Details: Citation update