2MA5

Solution NMR structure of PHD type Zinc finger domain of Lysine-specific demethylase 5B (PLU-1/JARID1B) from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7375C


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2MA5

Classification: OXIDOREDUCTASE

Total Structure Weight: 6905.13

Macromolecule Entities
Molecule Chains Length Organism Details
Lysine-specific demethylase 5B A 61 Homo sapiens EC#: 1.14.11 IUBMB
Fragment: UNP residues 1487-1544
Gene Name(s): KDM5B Gene View JARID1B PLU1 RBBP2H1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-28
  • Released Date: 2013-08-14
  • Deposition author(s): Hassan, F., Ramelot, T.A., Yang, Y., Cort, J.R., Janjua, H., Kohan, E., Lee, D., Xiao, R., Acton, T.B., Everett, J.K., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

Revision History

No revisions since initial release