2LKO

Structural Basis of Phosphoinositide Binding to Kindlin-2 Pleckstrin Homology Domain in Regulating Integrin Activation

Structural Biology Knowledgebase: 2LKO SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2LKO

Classification: CELL ADHESION

Total Structure Weight: 16222.33

Macromolecule Entities
Molecule Chains Length Organism Details
Fermitin family homolog 2 A 138 Homo sapiens Fragment: PH domain residues 367-500
Gene Name(s): FERMT2 Gene View KIND2 MIG2 PLEKHC1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
4IP
Query on 4IP

A INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
C6 H16 O18 P4
CIPFCGZLFXVXBG-CNWJWELYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
4IP N/A in BindingDB
N/A in BindingMoad
Kd: 2120 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-10-17
  • Released Date: 2011-10-26
  • Deposition author(s): Liu, J., Fukuda, K., Xu, Z.

Revision History

  • 2011-12-28
    Type: Citation | Details: Citation update