2LHA

Solution structure of C2B with IP6


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 10
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2LHA

Classification: METAL BINDING PROTEIN

Total Structure Weight: 18012.24

Macromolecule Entities
Molecule Chains Length Organism Details
Synaptotagmin-1 A 152 Homo sapiens Fragment: C2B domain, UNP residues 272-422
Gene Name(s): SYT1 Gene View SVP65 SYT
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IHP
Query on IHP

A INOSITOL HEXAKISPHOSPHATE
C6 H18 O24 P6
IMQLKJBTEOYOSI-GPIVLXJGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
IHP N/A in BindingDB
N/A in BindingMoad
Kd: 6400 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 10
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-08-08
  • Released Date: 2012-05-02
  • Deposition author(s): Joung, M., Mohan, S.K., Yu, C.

Revision History

  • 2016-04-27
    Type: Non-polymer description