2KSY

Solution nmr structure of sensory rhodopsin II


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 30
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2KSY

Classification: MEMBRANE PROTEIN

Total Structure Weight: 26740.40

Macromolecule Entities
Molecule Chains Length Organism Details
Sensory rhodopsin II A 247 Natronomonas pharaonis Gene Name(s): sopII NP_4834A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Bacterial and Algal Rhodopsins

Protein Name: Sensory Rhodopsin II (SRII)


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RET
Query on RET

A RETINAL
C20 H28 O
NCYCYZXNIZJOKI-OVSJKPMPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 30
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-01-14
  • Released Date: 2010-06-02
  • Deposition author(s): Gautier, A., Mott, H.R., Bostock, M.J., Kirkpatrick, J.P., Nietlispach, D.

Revision History

  • Version 1_0: 2010-06-02

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2015-06-10

    Type: Non-polymer description, Structure summary