2K03

Structure of SDF1 in complex with the CXCR4 N-terminus containing a sulfotyrosine at postition 21


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: Target Function

Literature

Macromolecules
Sequence Display for 2K03

Classification: CYTOKINE

Total Structure Weight: 25575.33

Macromolecule Entities
Molecule Chains Length Organism Details
Stromal cell-derived factor 1 A, C 70 Homo sapiens Fragment: SDF-1-alpha(3-67) domain
Mutation: L36C, A65C
Gene Name(s): CXCL12 Gene View SDF1 SDF1A SDF1B
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
C-X-C chemokine receptor type 4 B, D 40 Homo sapiens Fragment: N-terminus, residues 1-38
Mutation: C128A
Gene Name(s): CXCR4 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
TYS
Query on TYS
B, D L-PEPTIDE LINKING C9 H11 N O6 S TYR

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: TARGET FUNCTION

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-01-24
  • Released Date: 2008-10-28
  • Deposition author(s): Volkman, B.F., Veldkamp, C.T., Peterson, F.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4