2JQR

Solution model of crosslinked complex of cytochrome c and adrenodoxin


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 10
  • Conformers Submitted: 10
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2JQR

Classification: ELECTRON TRANSPORT

Total Structure Weight: 24505.43

Macromolecule Entities
Molecule Chains Length Organism Details
Cytochrome c iso-1 A 108 Saccharomyces cerevisiae Mutation: V28C, C102T
Gene Name(s): CYC1 Gene View YJR048W J1653
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Adrenodoxin, mitochondrial B 105 Bos taurus Fragment: 2Fe-2S ferredoxin-type domain, residues 62-166
Mutation: L80C, C95S
Gene Name(s): FDX1 Gene View ADX
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEC
Query on HEC

A HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FES
Query on FES

B FE2/S2 (INORGANIC) CLUSTER
Fe2 S2
NIXDOXVAJZFRNF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 10
  • Conformers Submitted: 10
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-06-07
  • Released Date: 2008-04-22
  • Deposition author(s): Xu, X., Reinle, W., Hannemann, F., Konarev, P.V., Svergun, D.I., Bernhardt, R., Ubbink, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4