2GPP

Estrogen Related Receptor-gamma ligand binding domain complexed with a RIP140 peptide and synthetic ligand GSK4716


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.232

Literature

Macromolecules
Sequence Display for 2GPP

Classification: TRANSCRIPTION

Total Structure Weight: 58119.68

Macromolecule Entities
Molecule Chains Length Organism Details
Estrogen-related receptor gamma A, B 230 Homo sapiens Fragment: Residues (229-458)
Gene Name(s): ESRRG Gene View ERR3 ERRG2 KIAA0832 NR3B3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Nuclear receptor-interacting protein 1 C, D 25 Homo sapiens Fragment: Residues (366-390)
Gene Name(s): NRIP1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1BA
Query on 1BA

A 4-HYDROXY-N'-(4-ISOPROPYLBENZYL)BENZOHYDRAZIDE
C17 H20 N2 O2
MFDXHRPPSJRQFX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
1BA N/A in BindingDB
N/A in BindingMoad
IC50: 2000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.232
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 203.81 α = 90.00
b = 203.81 β = 90.00
c = 53.46 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-04-18
  • Released Date: 2006-09-26
  • Deposition author(s): Wang, L., Zuercher, W.J., Consler, T.G., Lambert, M.H., Miller, A.B., Osband-miller, L.A., McKee, D.D., Willson, T.M., Nolte, R.T.

Revision History

  • Version 1_0: 2006-09-26

    Type: Initial release

  • Version 1_1: 2007-10-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance