An activated, tetrameric gamma-delta resolvase: Hin chimaera bound to cleaved DNA DOI:10.2210/pdb2gm4/pdb   NDB ID: PD0797

2GM4   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Recombination , DNA Structure Weight: 74389.50 Molecule: 5'-D(*CP*AP*GP*TP*GP*TP*CP*CP*GP*AP*TP*AP*AP*TP*TP*TP*AP*TP*AP*AP*A)-3' Polymer: 1 Type: dna Length: 21 Chains: I, J, X, Z Molecule: 5'-D(*TP*TP*AP*TP*CP*GP*GP*AP*CP*AP*CP*TP*G)-3' Polymer: 2 Type: dna Length: 13 Chains: K, Y Molecule: Transposon gamma-delta resolvase Polymer: 3 Type: protein Length: 183 Chains: A, B Mutation: R2A, E56K, G96S, S98D, D100S, G101S, E102A, K105R, E124Q Organism Escherichia coli Gene Names tnpR ECOK12F009 UniProtKB:   Protein Feature View | Search PDB | P03012         Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1GDT  Crystal structure of a site-specific recombinase, gamma-delta resolvase complexed with a 34 BP cleavage site  1ZR2  Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently Linked to two Cleaved DNAs  1ZR4  Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAs  2GM5  An activated, truncated gamma-delta resolvase tetramer  2RSL  Refinement of gamma delta resolvase reveals a strikingly flexible molecule      External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   CATH Classification v3.4.0: 6 Domains - data from CATH   Pfam Classification: 2 Domains - data from Pfam   GO Terms: 4 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: PD0797     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Kamtekar, S.,  Ho, R.S.,  Li, W.,  Steitz, T.A. Deposition:   2006-04-05 Release:   2006-06-27 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance 2011-07-13 Flag residual B-value     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors Resolution[Å]:   3.50 R-Value: 0.282 (obs.) R-Free: 0.323 Space Group: P 21 21 2 Unit Cell:   Length [Å] Angles [°] a = 110.14 α = 90.00  b = 137.69 β = 90.00  c = 83.47 γ = 90.00