2DPY

Crystal structure of the flagellar type III ATPase FliI

Structural Biology Knowledgebase: 2DPY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.244

Literature

Macromolecules
Sequence Display for 2DPY

Classification: HYDROLASE

Total Structure Weight: 94762.34

Macromolecule Entities
Molecule Chains Length Organism Details
Flagellum-specific ATP synthase A, B 438 Salmonella enterica EC#: 3.6.3.14 IUBMB
Fragment: residues 19-456
Gene Name(s): fliI fla AIII flaC STM1972
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

B ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.244
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.16 α = 90.00
b = 72.75 β = 94.13
c = 125.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-05-18
  • Released Date: 2006-12-26
  • Deposition author(s): Imada, K., Namba, K., Minamino, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4