2CG1

AGAO in complex with wc11b (Ru-wire inhibitor, 11-carbon linker, data set b)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.67 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.160

Literature

Macromolecules
Sequence Display for 2CG1

Classification: OXIDOREDUCTASE

Total Structure Weight: 73218.00

Macromolecule Entities
Molecule Chains Length Organism Details
PHENYLETHYLAMINE OXIDASE A 646 Arthrobacter globiformis EC#: 1.4.3.21 IUBMB
Fragment: AGAO HOLOENZYME, RESIDUES 3-638
Details: RESIDUE A382 WAS AN ACTIVE SITE TYROSINE RESIDUE, WHICH WAS SELF-PROCESSED TO BECOME A TPQ
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
11R
Query on 11R

A RUTHENIUM WIRE, 11 CARBON LINKER
1'H-2, (Synonym)
C51 H75 N7 O Ru
SFKGVLGUYUYVDK-VLYCCRBHBW
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CU
Query on CU

A COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
TPQ
Query on TPQ
A L-PEPTIDE LINKING C9 H9 N O5 TYR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.67 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.160
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 157.92 α = 90.00
b = 63.04 β = 112.19
c = 92.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-02-27
  • Released Date: 2007-05-01
  • Deposition author(s): Langley, D.B., Duff, A.P., Freeman, H.C., Guss, J.M., Juda, G.A., Dooley, D.M., Contakes, S.M., Halpern-Manners, N.W., Dunn, A.R., Gray, H.B.

Revision History

  • Version 1_0: 2007-05-01

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance