2CFV

Crystal structure of human protein tyrosine phosphatase receptor type J


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 2CFV

Classification: HYDROLASE

Total Structure Weight: 37037.71

Macromolecule Entities
Molecule Chains Length Organism Details
HUMAN PROTEIN TYROSINE PHOSPHATASE RECEPTOR TYPE J A 316 Homo sapiens EC#: 3.1.3.48 IUBMB
Fragment: RESIDUES 1019-1311
Gene Name(s): PTPRJ Gene View DEP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.201
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 86.06 α = 90.00
b = 86.06 β = 90.00
c = 119.54 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-02-23
  • Released Date: 2006-03-09
  • Deposition author(s): Debreczeni, J.E., Barr, A.J., Eswaran, J., Ugochukwu, E., Sundstrom, M., Weigelt, J., Arrowsmith, C., Edwards, A., Knapp, S.

Revision History

  • Version 1_0: 2006-03-09

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Refinement description, Version format compliance

  • Version 1_2: 2012-06-20

    Type: Other