2B0E

EcoRV Restriction Endonuclease/GAAUTC/Ca2+

Structural Biology Knowledgebase: 2B0E SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.314
  • R-Value Work: 0.234

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2B0E

Classification: HYDROLASE / DNA

Total Structure Weight: 64145.84


Macromolecule Entities
Molecule Chains Length Organism Details
Type II restriction enzyme EcoRV A, B 245 Escherichia coli EC#: 3.1.21.4 IUBMB
Gene Name(s): ecoRVR
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*AP*AP*AP*GP*AP*AP*(DU)P*TP*CP*TP*T)-3' C, D 11 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.314
  • R-Value Work: 0.234
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.10 α = 97.00
b = 48.50 β = 109.00
c = 63.90 γ = 106.70

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-09-13
  • Released Date: 2005-09-27
  • Deposition author(s): Hiller, D.A., Rodriguez, A.M., Perona, J.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4