POP-OUT | CLOSE
EcoRV Restriction Endonuclease/GAATTC/Ca2+
DOI:10.2210/pdb2b0d/pdb   NDB ID: PD0713
2B0D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/dna
    Structure Weight: 64173.88
    Molecule: 5'-D(*AP*AP*AP*GP*AP*AP*TP*TP*CP*TP*T)-3'
    Polymer: 1 Type: dna Length: 11
    Chains: C, D
    Molecule: Type II restriction enzyme EcoRV
    Polymer: 2 Type: protein Length: 245
    Chains: A, B
    EC#: 3.1.21.4   
    Organism Escherichia coli
    Gene Name ecoRVR
    UniProtKB:   Protein Feature View | Search PDB | P04390  
     
  •   Structure Validation Hide

    Download full validation report    

     
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1AZ0   
    1BSU   
    2B0E   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
    Search 
    Download 
    CA Ca
    CALCIUM ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0713
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Hiller, D.A.,  Rodriguez, A.M.,  Perona, J.J.

    Deposition:   2005-09-13
    Release:   2005-09-27
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.220 (work)
    R-Free: 0.302
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 48.00 α = 97.20 
    b = 48.40 β = 109.00 
    c = 63.60 γ = 106.60