2ZVS

Crystal structure of the 2[4FE-4S] ferredoxin from escherichia coli

Structural Biology Knowledgebase: 2ZVS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.203

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2ZVS

Classification: ELECTRON TRANSPORT

Total Structure Weight: 31126.28

Macromolecule Entities
Molecule Chains Length Organism Details
Uncharacterized ferredoxin-like protein yfhL A, B, C 85 Escherichia coli Gene Name(s): yfhL b2562 JW2546
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SF4
Query on SF4

A, B, C IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.203
  • Space Group: P 62

Unit Cell:

Length (Å) Angle (°)
a = 65.54 α = 90.00
b = 65.54 β = 90.00
c = 132.37 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-11-18
  • Released Date: 2009-08-25
  • Deposition author(s): Giastas, P., Mavridis, M.I.

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4